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corpus Phase 00: environment audit, corpus retrieval, mandate preservation
verify_cache Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
arxiv_seed.xml Phase 00: environment audit, corpus retrieval, mandate preservation
build_literature_matrix.py Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
code_corpus.py Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
corpus_automated.csv Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
corpus_coding_protocol.md Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
corpus_coding.csv Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
corpus_manifest.csv Phase 00: environment audit, corpus retrieval, mandate preservation
corpus_summary.md Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
literature_matrix.csv Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
make_coding.py Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
novelty_matrix.csv Task suite (F1,F2,F4,F5,F6 + partial F3), evaluator validation, analysis...
references_verified.bib Phases 02-05: protocol, harness, viewer/capture, live smoke experiment (4 arms)
source_notes.md Task suite (F1,F2,F4,F5,F6 + partial F3), evaluator validation, analysis...

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