| 0 Feasibility & protocol |
done 2026-11-02 (PI checkpoint H-0 pending) |
reports/PHASE0_FEASIBILITY.md, RESEARCH_PLAN.md, protocol/PROTOCOL.md, protocol/amendments.csv (A-000…A-004) |
| 1 Bibliographic corpus |
v1 done (6.40 M eligible core works from pass 1); pass 2 (1.12 M DBLP/arXiv-linked ids) ≈ 75 % when M3U96b froze (incident I-4) — resumes automatically, then ingestion/run_pass2_chain.sh builds corpus v2 |
data/metadata/prisma_counts.json, linkage_report.json, reports/INCIDENTS.md |
| 2 Taxonomy |
ontology v1.0 delivered (Agent D); classifier tested (9 ms/work); sharded run armed on M3U96b + M3U96a after corpus v2; validation raters ready (A-003) |
taxonomy/ontology.yaml, taxonomy/ONTOLOGY.md, taxonomy/VALIDATION.md, tests/ (7/7) |
| 3 Knowledge graph |
citation graph scripts tested on v1 (165 M references; internal/external edges, field flows); SPECTER2 embeddings running (4.87 M abstracts, 98 shards; M3U96a + M4M64c active, M3U96b/M4M64a shares to resume); semantic k-NN edges and LLM extraction scripts ready (A-004) |
knowledge_graph/01–04, embeddings/ |
| 4 Statistics |
volume, collaboration, citation-window, venue, country tables and 12 figures generated on v1; structural-change toolkit tested (ITS, placebo, Bai–Perron, PELT, BOCPD) |
results/, figures/, econometrics/ |
| 5 Literature synthesis |
581-entry verified bibliography delivered (Agent B-lit); specialist briefs ready; landmark selection script ready |
manuscript/references.bib, literature_synthesis/REFERENCE_MAP.md, agents/briefs/ |
| 6 Emerging-research detection |
framework implemented (features, out-of-time labels, baselines, metrics); runs after classification + citation graph v2 |
experiments/emerging_detection.py |
| 7 Manuscript |
skeleton (11 parts + 8 appendices, numbers macros); Parts II, III, IV being written by three writer agents |
manuscript/ |
| 8 Independent audit |
code audit by Agent N in progress |
reports/audit/ |
| 9 Release |
pending |
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