| 1 |
ontology.yaml note says "max over matched topics"; classify.py sums weights then caps at 1 per signal |
code is the rule; YAML note to be corrected (taxonomy/src) |
| 2 |
VALIDATION.md promises Krippendorff α (MASI); validate_sample.py computes mean Jaccard |
add α (MASI) to validate_sample.py --metrics |
| 3 |
Protocol E7 = penumbra; code e7 = generic-deposit exclusion |
rename in protocol: E7 generic deposit (A-002), penumbra = separate flag, amendment A-005 |
| 4 |
H5 says Gini on 24-month citations; code uses c36; c12 = pub year + next calendar year |
report both c12 and c36 Gini; define windows as calendar-year windows explicitly (Part IV already does) |
| 5 |
Placebo breaks run over baseline AND post months |
add --placebo-baseline-only option and report both |
| 6 |
Right truncation by last-complete-month cut + sensitivity, not lag correction; no donut windows / binary segmentation / sup-F |
document; add donut-window option to ITS (exclude ±3 months); sup-F not planned (DP + BIC/LWZ kept) |
| 7 |
ITS event = first full month after each date |
document (already in text) |
| 8 |
Semantic centroids by calendar-year periods; split-half ARI on one UMAP fit |
document as implemented; optional bootstrap later |
| 9 |
Emerging detector: topics only, volume-only label, fewer features, cutoffs to 2021-12, unstandardised logistic |
add feature standardisation + novelty/cross-area merge when available; label with citation-share variant as sensitivity; cutoffs extended to 2022-09 (labels observable by 2024-09 for h=24) |
| 10 |
No igraph author/institution networks; CAGR, bootstrap CIs, diversity indices not scripted |
add bibliometrics/04_diversity_cagr.py (CAGR, Rao–Stirling, Leinster–Cobbold, bootstrap CIs) and institution/country co-authorship graph metrics |
| 11 |
DBLP arXiv-step linked 0 records (DBLP now uses 10.48550 DOIs) |
documented in Part III; DOI step already captures them |