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batch_admin.py Eval suite runner, blind human-evaluation sheet generator
build_corpus.py WP-AI-0002: repository scaffold, licence governance, PMC S3 ingest, JATS parser,...
build_figures.py Protect BibTeX-key citations (protocol 1.1), standardised stylometry figure
build_medium_corpus.sh build_medium_corpus: configurable fixed splits
discover_arxiv.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
discover_books.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
discover_crossref.py Eval suite runner, blind human-evaluation sheet generator
discover_pmc.py WP-AI-0002: repository scaffold, licence governance, PMC S3 ingest, JATS parser,...
evaluate.py Configurable bootstrap count, confirmatory flag, freeze script
export_release.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
freeze_preregistration.py Eval suite runner, blind human-evaluation sheet generator
make_human_eval_sheet.py Eval suite runner, blind human-evaluation sheet generator
make_splits.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
pilot_rewrite_job.sh Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
predict_b2_hf.py B2 T5-small baseline results (val, exploratory), predict_b2_hf script
predict.py WP-AI-0002: repository scaffold, licence governance, PMC S3 ingest, JATS parser,...
pretrain_denoise.py Denoising pretraining stage (unlabelled originals), --init-from fine-tuning,...
relabel_disciplines.py Eval suite runner, blind human-evaluation sheet generator
rewrite.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
run_eval_suite.sh Eval suite runner, blind human-evaluation sheet generator
train_b2_hf.py Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...
train_tokenizer.py Medium corpus v0 (13 372 docs / 371 419 eligible passages) summaries; tokenizer...
train.py Single-term loss diagnostics presets
validate_pairs.py WP-AI-0002: repository scaffold, licence governance, PMC S3 ingest, JATS parser,...
vertical_slice.sh Add arXiv/LaTeX, Crossref/PDF and books adapters (agents), governance docs,...

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