spb/cancerindex

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39commits
1branches
0releases
2.9 MBon disk
maindefault branch
1 mo agolast push

Fri, Sep 11, 2026 4
1. Data explorer: /explore (metric × cancers × geography × sex × age × years → comparable chart groups + table + CSV/JSON/permalink), coverage matrix, /v1/epidemiology API, methodology
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  Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
  Simon-Pierre Boucher 1 mo ago · 1 file +115
2. Clinical trial intelligence: per-cancer trial metrics (growth, enrollment, sponsor/country HHI, termination share, burden-normalized), stop-reason classifier, 4 ranking snapshots, /trials/intelligence and /trials/terminated, API, CSV, cancer tab strip
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  Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
  Simon-Pierre Boucher 1 mo ago · 1 file +192
3. Clinical trial map: country site aggregates (trial_site_country_counts), ISO mapping, Equal Earth choropleth, /trials/map, /v1/trials/sites, methodology
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  Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
  Simon-Pierre Boucher 1 mo ago · 1 file +49
4. Research Gap Index: components table, share/log2-ratio metrics, per-1000-deaths snapshots, /research-gap page with log-log scatter, API, CSV export, methodology
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  Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
  Simon-Pierre Boucher 1 mo ago · 1 file +149
Tue, Sep 8, 2026 5
1. Resolver: byCode carries recorded match types (alias/lineage codes); MeSH/ChEMBL docs
  
  Simon-Pierre Boucher 2 mo ago · 1 file +19 −2
2. Web: paginate approvals and gene cohort tables
  
  Simon-Pierre Boucher 2 mo ago · 1 file +16 −2
3. SDK HttpClient: body-read timeout with retry (stalled ChEMBL responses)
  
  Simon-Pierre Boucher 2 mo ago · 2 files +27 −5
4. Wave 2: SDK checkpoints/abort/anomaly guard/alerts, cix doctor, backups, perf indexes, migration 0001; MeSH, ChEMBL, openFDA, cBioPortal connectors; web pagination/QA/tests/caching, countries, compare, key figures; USCS sex-specific rate fix
  
  Simon-Pierre Boucher 2 mo ago · 8 files +575
5. Phase 1: NCIt/OncoTree/HGNC/CIViC/ClinVar/GDC/ClinicalTrials/PubMed/CDC WONDER connectors, ranking engine, Fastify API, pg-boss worker, Next.js web app, docs, deploy
  
  Simon-Pierre Boucher 2 mo ago · 25 files +10,916